Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909171.1_cds_XP_016459406.1_52937
CDS Infomation

[gene=LOC107782964] [db_xref=GeneID:107782964] [protein=beta-glucosidase BoGH3B-like] [protein_id=XP_016459406.1] [location=join(3680..3902,5517..5721,6154..6244,6350..6495,6894..7137,7392..7496,7651..7689,8055..8198,8340..8544,8934..9420,9858..9954)] [gbkey=CDS]
Sequence

ATGGGTAAGAAAAGCTGGATTTTGTGGGTTGTGACTCTGCTGCTATGTTGGAGCAAGATT
GCAATGGCTAAAAAGAACATCAAGTATAAGGACCCAAAACAACCAGTTGAGGTTAGAGTT
AAAGATCTTCTTGGTAGAATGACCCTTGCAGAAAAGATTGGTCAGATGACTCAGATTGAT
AGGTCTAGTGCTACAATCCAAGTCATGAAAGATTACTATATTGGGAGTGTATTAAGTGGT
GGGGGAAGTGAGCCACTTCCGAAAGCTACTGCTGCAGATTGGGTTAATATGGTGAATGAC
TACCAAAATGGTTCTATGTCAACTCGCCTTGGGATTCCAATGATATATGGGATTGATGCC
ATTCATGGACACAACAATGTTTTCAATGCCACCATATTTCCACATAACGTTGGGCTTGGA
GCTGCTAGGGACCCTGAACTCATGCGAAGGATTGGTGCTGCTACTGCTCTTGAAGTTAGA
GCTACAGGGATTCCTTATGCATTTGCTCCTTGCATCGCTGTTTGCAGAGATCCTAGGTGG
GGCCGCTGTTATGAAAGTTATAGTGAAGATCCCAAGATTGTTCAAGAAATGACAGATATT
ATAATTGGGTTACAAGGCGAAATTCCTTATGAATCGAGGAAGGGCATACCTTATGTTGCT
GGAAAGAATAAGGTGGCTGCTTGTGCAAAGCACTTTGTTGGCGATGGGGGCACAACTAAG
GGTATTAATGAGAATAACACCGTGACTAACATGCATGAGTTACTAAGTATTCACATGCCT
GCCTACGACGACGCAATTATCAAAGGTGTTGCTACAGTAATGGCTTCTTATTCTAGCTGG
AATGGCCAAAAGATGCATGCAAACCATGATCTAGTTACTGGTTTTCTCAAGGGCACACTC
AAGTTCAAGGGTTTTGTCATTTCAGATTGGGAAGGTATTGACAGGATTACCTCTCCACCT
CATGCCAACTACACTTATTCAGTTGAGAGTAGCATTCTAGCTGGAATAGACATGGTTATG
GTCCCATATAATTTCACCGAGTTTATCAATGATCTCACTTACCTTGTCAAGAACAATTTT
ATCCCAATGGCTCGTATTGATGATGCAGTGGAGAGGATTTTGTTAGTTAAATTTACCATG
GGACTTTTTGAGAACCCCTACACTGATTTCAGCCTCATCAAAGAGGTCGGGAGCCAGGAA
CACAGGAACTTAGCAAGGGAAGCTGTGCGGAAATCTCTTGTACTGCTGAAGAATGGGAAA
ACTGCTAATGACCCATTGCTACCTCTTCCTAAGAAAGTGTCTAAAATTTTGGTCGCTGGT
AGCCATGCTGATAACTTAGGTTTTCAATGTGGTGGATGGACTATTGCGTGGCAGGGGTTT
AGTGGTAATGACGATACAGGAGGGACTACCATCCTTGGTGCAATAAAGTCTGCAGTAGAT
CCAGGAACAGAAGTAACCTATGTTGAGAATCCTGACAGCAAGTATGCTAGTTCTGGTGGC
TTTGACTATGCTATTGTGGTTGTTGGCGAGCGTCCTTATGCTGAGACGGCAGGAGACAGT
CCTACTCTCACAATAGCAGATTCTGGGCCTGATGTCATTAACCATGTTTGCCCGTCCGTG
AAGTGTGTTGTAATCATCATATCTGGTCGACCGCTTGTGATTGAACCATATCTACCTTCA
ATTGATGCACTTGTAGCAGCCTGGTTACCTGGTAGTGAAGGACAAGGTATCACTGATATT
CTCTTTGGGGACTATGGATTTACTGGAAAACTTCCAAGAACATGGTTCAAAACTGTAGAT
CAACTTCCAATGAACGTTGGTGACCCCCACTATGATCCACTGTTTCCTTTTGGATTTGGG
CTCAACACATCTAAGTCAACAGTGGCAAGGTCTGTATCGTCAGGTGCTGTTGGAAAGCCA
TATGTCTTTGGGATTATGGTTTCTGTATTTATTGGTTTGTGGAGTGTATCCAGAGCATTC
TATTGA

Peptide Sequence

PEP ID

XP_016459406.1
PEP Infomation

PREDICTED: beta-glucosidase BoGH3B-like [Nicotiana tabacum]
Sequence

MGKKSWILWVVTLLLCWSKIAMAKKNIKYKDPKQPVEVRVKDLLGRMTLAEKIGQMTQID
RSSATIQVMKDYYIGSVLSGGGSEPLPKATAADWVNMVNDYQNGSMSTRLGIPMIYGIDA
IHGHNNVFNATIFPHNVGLGAARDPELMRRIGAATALEVRATGIPYAFAPCIAVCRDPRW
GRCYESYSEDPKIVQEMTDIIIGLQGEIPYESRKGIPYVAGKNKVAACAKHFVGDGGTTK
GINENNTVTNMHELLSIHMPAYDDAIIKGVATVMASYSSWNGQKMHANHDLVTGFLKGTL
KFKGFVISDWEGIDRITSPPHANYTYSVESSILAGIDMVMVPYNFTEFINDLTYLVKNNF
IPMARIDDAVERILLVKFTMGLFENPYTDFSLIKEVGSQEHRNLAREAVRKSLVLLKNGK
TANDPLLPLPKKVSKILVAGSHADNLGFQCGGWTIAWQGFSGNDDTGGTTILGAIKSAVD
PGTEVTYVENPDSKYASSGGFDYAIVVVGERPYAETAGDSPTLTIADSGPDVINHVCPSV
KCVVIIISGRPLVIEPYLPSIDALVAAWLPGSEGQGITDILFGDYGFTGKLPRTWFKTVD
QLPMNVGDPHYDPLFPFGFGLNTSKSTVARSVSSGAVGKPYVFGIMVSVFIGLWSVSRAF
Y

Transcript Sequence

Gene sequence data has not been registered.